Phosphatase GeneID MbreP049 - Revision history

Mark at 18:55, 30 September 2015

2015-09-30T18:55:30Z

Mark at 18:55, 30 September 2015

2015-09-30T18:55:09Z

Mark at 18:46, 30 September 2015

2015-09-30T18:46:44Z

Mark: Created page with "Remove. It is redundant to MbreP048. Below are the result of BLATing the protein sequences against masked scaffold sequences from JGI Monosiga genome project. match mis- ..."

2015-09-30T18:44:51Z

Created page with "Remove. It is redundant to MbreP048. Below are the result of BLATing the protein sequences against masked scaffold sequences from JGI Monosiga genome project. match mis- ..."

New page

Remove. It is redundant to MbreP048. Below are the result of BLATing the protein sequences against masked scaffold sequences from JGI Monosiga genome project.

match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts
match match count bases count bases name size start end name size start end count
---------------------------------------------------------------------------------------------------------------------------------------------------------------
7041 0 0 0 1 1 2 283 +- MbreP048_jgi|Monbr1|22472|fgenesh2_pg.scaffold_2000679 7042 0 7042 scaffold_2 3607471 2797910 2819316 3 71,2241,4729, 0,71,2313, 788155,788547,795374,
1726 0 0 0 0 0 0 0 +- MbreP049_jgi|Monbr1|2269|gw1.2.563.1 1726 0 1726 scaffold_2 3607471 2797910 2803088 1 1726, 0, 804383,

← Older revision		Revision as of 18:55, 30 September 2015
Line 1:		Line 1:
	Remove. It is redundant to MbreP048. Below are the result of BLATing the protein sequences against masked scaffold sequences from JGI Monosiga genome project ([http://www.ensembl.org/info/website/upload/psl.html#fields PSL format]).		Remove. It is redundant to MbreP048. Below are the result of BLATing the protein sequences against masked scaffold sequences from JGI Monosiga genome project ([http://www.ensembl.org/info/website/upload/psl.html#fields PSL format]).
		+
		+	Both the gene models are present in the data of JGI Monosiga genome project.

@@ Line 3: / Line 3: @@
 Both the gene models are present in the data of JGI Monosiga genome project.
     0       0       0       1       1       2       283     +-      MbreP048_jgi|Monbr1|22472|fgenesh2_pg.scaffold_2000679  7042    0       7042     scaffold_2      3607471 2797910 2819316 3       71,2241,4729,   0,71,2313,      788155,788547,795374,
     0       0       0       0       0       0       0       +-      MbreP049_jgi|Monbr1|2269|gw1.2.563.1    1726    0       1726    scaffold_2       3607471 2797910 2803088 1       1726,   0,      804383,

@@ Line 1: / Line 1: @@
-Remove. It is redundant to MbreP048. Below are the result of BLATing the protein sequences against masked scaffold sequences from JGI Monosiga genome project.
+Remove. It is redundant to MbreP048. Below are the result of BLATing the protein sequences against masked scaffold sequences from JGI Monosiga genome project ([http://www.ensembl.org/info/website/upload/psl.html#fields PSL format]).
-match   mis-    rep.    N's     Q gap   Q gap   T gap   T gap   strand  Q               Q       Q       Q       T               T       T       T        block   blockSizes      qStarts  tStarts
+match   mis-]    rep.    N's     Q gap   Q gap   T gap   T gap   strand  Q               Q       Q       Q       T               T       T       T        block   blockSizes      qStarts  tStarts
          match   match           count   bases   count   bases           name            size    start   end     name            size    start   end      count
 ---------------------------------------------------------------------------------------------------------------------------------------------------------------
     0       0       0       1       1       2       283     +-      MbreP048_jgi|Monbr1|22472|fgenesh2_pg.scaffold_2000679  7042    0       7042     scaffold_2      3607471 2797910 2819316 3       71,2241,4729,   0,71,2313,      788155,788547,795374,
     0       0       0       0       0       0       0       +-      MbreP049_jgi|Monbr1|2269|gw1.2.563.1    1726    0       1726    scaffold_2       3607471 2797910 2803088 1       1726,   0,      804383,